Motif IL_87030.3 Version IL_87030.3 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 4-7 | 4-8 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8OI5_024 | 8OI5 | 0.2510 | 0 | 1 | LSU rRNA | G | 678 | U | 679 | U | 680 | U | 681 | G | 682 | * | C | 694 | G | 695 | U | 696 | A | 697 | C | 698 | cWW | cBW | cWW | |
| 2 | IL_9SUM_020 | 9SUM | 0.1785 | 0 | A | LSU rRNA | G | 626 | U | 627 | A | 628 | C | 629 | G | 630 | * | C | 642 | C | 643 | U | 644 | G | 645 | C | 646 | cWW | ncWW | cWW | |
| 3 | IL_9PN5_021 | 9PN5 | 0.0000 | 0 | A1 | LSU rRNA | G | 680 | U | 681 | U | 682 | U | 683 | G | 684 | * | C | 696 | A | 697 | U | 698 | A | 699 | C | 700 | cWW | cWW | ||
| 4 | IL_9AXU_021 | 9AXU | 0.1370 | 0 | 2 | LSU rRNA | G | 705 | U | 706 | U | 707 | U | 708 | G | 709 | * | C | 723 | A | 724 | U | 725 | C | 726 | C | 727 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUG*CGUAC | 1 |
| GUACG*CCUGC | 1 |
| GUUUG*CAUAC | 1 |
| GUUUG*CAUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUU*GUA | 1 |
| UAC*CUG | 1 |
| UUU*AUA | 1 |
| UUU*AUC | 1 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Heat map statistics
- Min 0.14 | Avg 0.15 | Max 0.25
Coloring options: