Motif IL_88403.1 Version IL_88403.1 of this group appears in releases 0.5 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 1-2 | 1-11 | 4-7 | 4-10 | 5-6 | 5-8 | 5-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2AW7_053 | 2AW7 | 0 | 0 | A | 16S ribosomal RNA | G | 1124 | U | 1125 | U | 1126 | G | 1127 | C | 1128 | * | G | 1144 | A | 1145 | A | 1146 | C | 1147 | U | 1148 | C | 1149 | cSH | cWW | cWW | tSH | cWW | ntSH | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUGC*GAACUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUG*AACU | 1 |
Release history
| Release | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2011-12-08 | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_88403.1 | Only in the child motif |
|---|---|---|---|
| IL_09587.1 Compare | IL_2AW7_053 | IL_4IOA_107 |
- Annotations
- Basepair signature
- cWW-cSH-L-cSW-cWW-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: