Motif IL_88948.1 Version IL_88948.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8VTW_052 | 8VTW | 0.0000 | 0 | tSH-tHW-tHS (H) | 1A | LSU rRNA | U | 1357 | G | 1358 | A | 1359 | A | 1360 | G | 1361 | * | C | 1370 | G | 1371 | U | 1372 | A | 1373 | G | 1374 | cWW | tSH | tWW | tHS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGAAG*CGUAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GAA*GUA | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tSH-tHW-tHS (H) (1)
- Basepair signature
- cWW-tSH-tWW-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: