Motif IL_90231.1 Version IL_90231.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 1-10 | 6-9 | 7-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1X8W_008 | 1X8W | 0.5935 | 1 | A | Tetrahymena ribozyme RNA | G | 406 | G | 408 | U | 409 | A | 410 | C | 411 | U | 412 | C | 413 | * | G | 313 | A | 314 | C | 315 | cWW | cWW | |
| 2 | IL_3SUX_006 | 3SUX | 0.0000 | 1 | X | THF riboswitch | C | 89||||17_555 | U | 91||||17_555 | C | 92||||17_555 | U | 93||||17_555 | C | 94||||17_555 | G | 95||||17_555 | C | 96||||17_555 | * | G | 6 | A | 7 | G | 8 | cWW | cWW | cWW |
| 3 | IL_3SUX_003 | 3SUX | 0.0000 | 1 | X | THF riboswitch | C | 89 | U | 91 | C | 92 | U | 93 | C | 94 | G | 95 | C | 96 | * | G | 6||||17_555 | A | 7||||17_555 | G | 8||||17_555 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUCUCGC*GAG | 2 |
| GAGUACUC*GAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUCUCG*A | 2 |
| AGUACU*A | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-L-L-L-cWW-cWW
- Heat map statistics
- Min 0.59 | Avg 0.26 | Max 0.59
Coloring options: