Motif IL_90612.1 Version IL_90612.1 of this group appears in releases 3.2 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-12 | 2-13 | 3-12 | 6-9 | 7-8 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_051 | 4LFB | 0.0000 | 0 | A | SSU rRNA | U | 1247 | A | 1248 | C | 1249 | A | 1250 | A | 1251 | A | 1252 | G | 1253 | * | C | 1284 | A | 1285 | A | 1286 | A | 1287 | A | 1288 | A | 1289 | G | 1290 | cWW | ntWH | tWH | tWW | cWW | |
| 2 | IL_4V88_459 | 4V88 | 0.7688 | 3 | A6 | SSU rRNA | G | 1480 | C | 1482 | A | 1483 | G | 1484 | C | 1485 | G | 1486 | A | 1487 | * | U | 1519 | U | 1520 | U | 1522 | A | 1524 | A | 1525 | A | 1526 | C | 1527 | cWW | tWH | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACAAAG*CAAAAAG | 1 |
| GCCAGCGA*UUGUGAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAAA*AAAAA | 1 |
| CCAGCG*UGUGAAA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWH-tWH-tWH-L-R-R-L-tWW-cWW
- Heat map statistics
- Min 0.77 | Avg 0.38 | Max 0.77
Coloring options: