#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 12 13 141-142-122-133-126-97-8
1 IL_4LFB_0514LFB0.00000A SSU rRNAU1247A1248C1249A1250A1251A1252G1253*C1284A1285A1286A1287A1288A1289G1290cWWntWHtWHtWWcWW
2 IL_4V88_4594V880.76883A6 SSU rRNAG1480C1482A1483G1484C1485G1486A1487*U1519U1520U1522A1524A1525A1526C1527cWWtWHtWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UACAAAG*CAAAAAG1
GCCAGCGA*UUGUGAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
ACAAA*AAAAA1
CCAGCG*UGUGAAA1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.17
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-05
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tWH-tWH-tWH-L-R-R-L-tWW-cWW
    Heat map statistics
    Min 0.77 | Avg 0.38 | Max 0.77
    Help

    Coloring options:

    IL_4LFB_051:IL_4LFB_051 = 0IL_4LFB_051:IL_4V88_459 = 0.7688IL_4V88_459:IL_4LFB_051 = 0.7688IL_4V88_459:IL_4V88_459 = 0IL_4LFB_051IL_4V88_459Discrepancy0.000.200.400.60
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