Motif IL_91102.2 Version IL_91102.2 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4W21_012 | 4W21 | 0.7664 | 0 | 5 | 28S ribosomal RNA | C | 180 | C | 181 | G | 182 | C | 183 | U | 184 | * | G | 253 | G | 254 | C | 255 | G | 256 | cWW | cWW | ||
| 2 | IL_4BPP_062 | 4BPP | 0.0000 | 1 | A | 18S RRNA | C | 1224 | U | 1225 | U | 1226 | G | 1227 | U | 1229 | * | A | 1202 | U | 1203 | U | 1204 | G | 1205 | cWW | cwW | cwW | cWW |
| 3 | IL_3J7A_023 | 3J7A | 0.8178 | 4 | A | SSU rRNA | C | 542 | A | 543 | G | 544 | A | 545 | C | 550 | * | G | 521 | G | 522 | U | 523 | G | 524 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCGCU*GGCG | 1 |
| CUUGAU*AUUG | 1 |
| CAGAGUAAC*GGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGC*GC | 1 |
| UUGA*UU | 1 |
| AGAGUAA*GU | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_91102.2 | Only in the parent motif |
|---|---|---|---|
| IL_91102.1 Compare | IL_3J7A_023, IL_4BPP_062 | IL_4W21_012 | IL_1VWW_004 |
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Heat map statistics
- Min 0.77 | Avg 0.54 | Max 0.86
Coloring options: