Motif IL_91482.1 Version IL_91482.1 of this group appears in releases 3.11 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_416 | 4V88 | 0.0000 | 5 | A6 | SSU rRNA | G | 616 | A | 622 | * | U | 1104 | C | 1105 | cWW | cWW | |
| 2 | IL_4YAZ_007 | 4YAZ | 0.7721 | 2 | Multiple bulged bases | R | Cyclic di-GMP-I riboswitch | U | 47 | G | 50 | * | C | 68 | G | 69 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAAAA*UC | 1 |
| UAAG*CG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAA* | 1 |
| AA* | 1 |
Release history
| Release | 3.11 |
|---|---|
| Date | 2018-10-19 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Multiple bulged bases (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.77 | Avg 0.39 | Max 0.77
Coloring options: