Motif IL_91482.3 Version IL_91482.3 of this group appears in releases 3.15 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_045 | 4V9F | 0.4426 | 2 | Bulged stacked bases | 0 | LSU rRNA | G | 1269 | U | 1270 | * | A | 1286 | C | 1289 | cWW | cWW |
| 2 | IL_4V88_416 | 4V88 | 0.0000 | 5 | A6 | SSU rRNA | U | 1104 | C | 1105 | * | G | 616 | A | 622 | cWW | cWW | |
| 3 | IL_4V9F_041 | 4V9F | 0.5649 | 1 | Single bulged G | 0 | LSU rRNA | C | 1225 | G | 1226 | * | U | 1136 | G | 1138 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GU*AAUC | 1 |
| UC*GUUAAAA | 1 |
| CG*UGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AU | 1 |
| *UUAAA | 1 |
| *G | 1 |
- Annotations
-
- (1)
- Single bulged G (1)
- Bulged stacked bases (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.44 | Avg 0.41 | Max 0.83
Coloring options: