Motif IL_91482.4 Version IL_91482.4 of this group appears in releases 3.18 to 3.26
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4YAZ_007 | 4YAZ | 0.7721 | 2 | Multiple bulged bases | R | Cyclic di-GMP-I riboswitch | U | 47 | G | 50 | * | C | 68 | G | 69 | cWW | cWW |
| 2 | IL_4V88_416 | 4V88 | 0.0000 | 5 | A6 | SSU rRNA | G | 616 | A | 622 | * | U | 1104 | C | 1105 | cWW | cWW | |
| 3 | IL_4V9F_045 | 4V9F | 0.4426 | 2 | Bulged stacked bases | 0 | LSU rRNA | A | 1286 | C | 1289 | * | G | 1269 | U | 1270 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAAG*CG | 1 |
| GUUAAAA*UC | 1 |
| AAUC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA* | 1 |
| UUAAA* | 1 |
| AU* | 1 |
Release history
| Release | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Bulged stacked bases (1)
- Multiple bulged bases (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.44 | Avg 0.49 | Max 0.99
Coloring options: