Motif IL_91543.1 Version IL_91543.1 of this group appears in releases 0.6 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 1-9 | 3-6 | 4-5 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_007 | 3U5F | 0.0000 | 2 | 6 | 18S rRNA | U | 64 | A | 65 | A | 67 | G | 69 | * | U | 82 | G | 83 | A | 84 | A | 85 | A | 86 | cWW | tHS | cWW |
| 2 | IL_4A1B_075 | 4A1B | 0.9765 | 2 | 1 | 26S RRNA | C | 1726 | U | 1727 | A | 1728 | G | 1730 | * | U | 1763 | G | 1764 | U | 1765 | A | 1766 | G | 1768 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUAAG*UGAAA | 1 |
| CUAUG*UGUAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAA*GAA | 1 |
| UAU*GUAU | 1 |
Release history
| Release | 0.6 |
|---|---|
| Date | 2012-04-02 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_91543.1 | Only in the child motif |
|---|---|---|---|
| IL_95939.1 Compare | IL_3U5F_007 | IL_4A1B_075 | |
| IL_91026.1 Compare | IL_4A1B_075 | IL_3U5F_007 | IL_4A1B_029 |
- Annotations
-
- (2)
- Basepair signature
- 09_cWW---cWW
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: