Motif IL_91549.1 Version IL_91549.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-3 | 1-9 | 4-9 | 5-7 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_387 | 4V88 | 0.0000 | 1 | A6 | SSU rRNA | G | 42 | A | 43 | U | 44 | U | 45 | A | 46 | G | 48 | * | C | 431 | G | 432 | C | 433 | cWW | ntSs | cWW | |||
| 2 | IL_5NWQ_002 | 5NWQ | 0.8887 | 1 | A | Guanidine-III riboswitch | G | 29 | C | 31 | A | 32 | A | 33 | G | 34 | A | 35 | * | U | 18 | A | 19 | C | 20 | tSW | cWW | ncsS | ntSH | cSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUUAAG*CGC | 1 |
| GACAAGA*UAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUAA*G | 1 |
| ACAAG*A | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tSW-L-L-cSW-cWW
- Heat map statistics
- Min 0.89 | Avg 0.44 | Max 0.89
Coloring options: