Motif IL_92205.1 Version IL_92205.1 of this group appears in releases 1.17 to 1.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2GDI_001 | 2GDI | 0.0000 | 0 | X | G | 18 | G | 19 | U | 20 | * | A | 45 | U | 46 | A | 47 | C | 48 | cWW | cWW | cWW |
| 2 | IL_2GDI_005 | 2GDI | 0.1331 | 0 | Y | G | 18 | G | 19 | U | 20 | * | A | 45 | U | 46 | A | 47 | C | 48 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGU*AUAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*UA | 2 |
Release history
| Release | 1.17 |
|---|---|
| Date | 2014-09-04 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_92205.1 | Only in the parent motif |
|---|---|---|---|
| IL_16029.2 Compare | IL_2GDI_005, IL_2GDI_001 | IL_3U5H_109, IL_4A1B_107, IL_3BNL_002, IL_4CUV_113 |
Children motifs
| Child motif | Common motif instances | Only in IL_92205.1 | Only in the child motif |
|---|---|---|---|
| IL_92205.2 Compare | IL_2GDI_005, IL_2GDI_001 | IL_3J7A_020 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-R-cWW
- Heat map statistics
- Min 0.13 | Avg 0.07 | Max 0.13
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