Motif IL_94707.1 Version IL_94707.1 of this group appears in releases 3.37 to 3.47
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_416 | 4V88 | 0.0000 | 3 | A6 | SSU rRNA | G | 616 | U | 617 | U | 618 | A | 622 | * | U | 1104 | C | 1105 | cWW | cWW | |
| 2 | IL_4V9F_045 | 4V9F | 0.8783 | 0 | Bulged stacked bases | 0 | LSU rRNA | A | 1286 | A | 1287 | U | 1288 | C | 1289 | * | G | 1269 | U | 1270 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAAAA*UC | 1 |
| AAUC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAA* | 1 |
| AU* | 1 |
Release history
| Release | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Bulged stacked bases (1)
- Basepair signature
- cWW-L-L-cWW
- Heat map statistics
- Min 0.88 | Avg 0.44 | Max 0.88
Coloring options: