#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 111-112-42-52-104-116-77-9
1 IL_4IOA_1074IOA0.00001Y 5S rRNAC35A36C37C38C39C40*G46A48C49U50G51cWWncSHncWWncWScWWntSW
2 IL_5J7L_3565J7L0.76900DB 5S rRNAG23G24U25C26C27C28*G56A57A58A59C60cWWtSWncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CACCCC*GAACUG1
GGUCCC*GAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
ACCC*AACU1
GUCC*AAA1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.47
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-21
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-R-R-tSW-L-L-cWW
    Heat map statistics
    Min 0.77 | Avg 0.38 | Max 0.77
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