Motif IL_95570.1 Version IL_95570.1 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-4 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6CK5_011 | 6CK5 | 0.0000 | 2 | A | Guanidine-I riboswitch | U | 36 | G | 37 | U | 39 | G | 41 | * | C | 21 | A | 22 | G | 23 | cWW | cWH | cWW | cWW |
| 2 | IL_4RUM_002 | 4RUM | 0.4466 | 1 | A | NiCo riboswitch | U | 38 | G | 39 | C | 40 | G | 42 | * | C | 20 | A | 21 | A | 22 | cWW | cWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUUCG*CAG | 1 |
| UGCAG*CAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUUC*A | 1 |
| GCA*A | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWH-R-L-cWW
- Heat map statistics
- Min 0.45 | Avg 0.22 | Max 0.45
Coloring options: