Motif IL_95908.2 Version IL_95908.2 of this group appears in releases 1.15 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4IOA_099 | 4IOA | 0.0000 | 1 | Multiple bulged bases (H) | X | LSU rRNA | C | 2674 | U | 2675 | * | A | 2690 | C | 2691 | A | 2692 | G | 2694 | cWW | cWW |
| 2 | IL_4NVV_102 | 4NVV | 0.1700 | 1 | A | 23S Ribosomal RNA | C | 2707 | U | 2708 | * | A | 2723 | U | 2724 | A | 2725 | G | 2727 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CU*ACAUG | 1 |
| CU*AUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *CAU | 1 |
| *UAA | 1 |
Release history
| Release | 1.15 |
|---|---|
| Date | 2014-06-20 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_95908.2 | Only in the parent motif |
|---|---|---|---|
| IL_95908.1 Compare | IL_4NVV_102, IL_4IOA_099 | IL_3U5F_086 |
Children motifs
| Child motif | Common motif instances | Only in IL_95908.2 | Only in the child motif |
|---|---|---|---|
| IL_68034.1 Compare | IL_4IOA_099 | IL_4NVV_102 | IL_4CUX_033 |
- Annotations
-
- Multiple bulged bases (H) (1)
- (1)
- Basepair signature
- cWW-R-R-cWW
- Heat map statistics
- Min 0.17 | Avg 0.09 | Max 0.17
Coloring options: