Motif IL_96141.3 Version IL_96141.3 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | 5-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_074 | 4WF9 | 0.0000 | 0 | Triple sheared | X | LSU rRNA | A | 1883 | G | 1884 | G | 1885 | A | 1886 | G | 1887 | * | C | 1909 | G | 1910 | A | 1911 | A | 1912 | U | 1913 | cWW | ntSH | tSH | ncWW | cWS | |
| 2 | IL_4UYK_004 | 4UYK | 0.2797 | 0 | Triple sheared | R | SRP RNA | U | 111 | G | 112 | G | 113 | A | 114 | G | 115 | * | C | 86 | G | 87 | A | 88 | A | 89 | G | 90 | cWW | tSW | tSH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGAG*CGAAU | 1 |
| UGGAG*CGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGA*GAA | 2 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Triple sheared (2)
- Basepair signature
- cWW-L-R-tSH-L-R-cWW
- Heat map statistics
- Min 0.28 | Avg 0.14 | Max 0.28
Coloring options: