Motif IL_96877.1 Version IL_96877.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 1-20 | 2-14 | 6-12 | 7-10 | 8-9 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AJ0_040 | 5AJ0 | 0 | 3 | A2 | LSU rRNA | G | 717 | C | 718 | G | 721 | G | 722 | A | 723 | A | 724 | G | 725 | G | 726 | * | C | 915 | A | 916 | G | 917 | C | 918 | A | 919 | G | 920 | C | 921 | C | 923 | U | 924 | C | 925 | G | 926 | C | 927 | cWW | ntWH | tHW | cWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCUGGGAAGG*CAGCAGCACUCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGGGAAG*AGCAGCACUCG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-R-R-R-R-R-tWH-L-R-L-L-tHW-R-cWH-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: