Motif IL_97803.1 Version IL_97803.1 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | break | 22 | 23 | 24 | 25 | 26 | 1-26 | 2-15 | 3-14 | 3-18 | 4-13 | 12-19 | 17-23 | 21-22 | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1VX6_146 | 1VX6 | 0 | 0 | C | 5.8S ribosomal RNA | C | 48 | C | 49 | G | 50 | C | 51 | A | 52 | G | 53 | C | 54 | A | 55 | A | 56 | A | 57 | A | 58 | U | 59 | G | 60 | C | 61 | G | 62 | A | 63 | U | 64 | A | 65 | C | 66 | G | 67 | C | 68 | * | G | 99 | A | 100 | A | 101 | U | 102 | G | 103 | cWW | cWW | cWW | tsS | cWW | cWW | ntWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCGCAGCAAAAUGCGAUACGC*GAAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGCAGCAAAAUGCGAUACG*AAU | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-R-R-cWW-tSS-cWW-cWW-bif-L-L-L-L-L-cWW-cSS-cSS-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: