Motif IL_99893.2 Version IL_99893.2 of this group appears in releases 4.7 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-6 | 2-10 | 3-13 | 4-12 | 5-11 | 6-10 | 7-8 | 9-12 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8GLP_334 | 8GLP | 0.0921 | 3 | S2 | SSU rRNA | U | 1492 | C | 1493 | G | 1495 | U | 1496 | A | 1498 | U | 1499 | G | 1500 | * | U | 1329 | G | 1330 | A | 1332 | U | 1333 | G | 1334 | G | 1335 | cWW | tWH | ntHS | ncBW | cWW | ncSW | cWW | cWH | |
| 2 | IL_9H3G_220 | 9H3G | 0.0000 | 3 | h1 | SSU rRNA | U | 1433 | C | 1434 | G | 1436 | U | 1437 | A | 1439 | U | 1440 | G | 1441 | * | U | 1273 | G | 1274 | A | 1276 | U | 1277 | G | 1278 | G | 1279 | cWW | ntSW | tWH | tHS | ncWWa | cWW | ncSW | cWW | cWH |
| 3 | IL_8P9A_439 | 8P9A | 0.0961 | 3 | sR | SSU rRNA | U | 1430 | C | 1431 | G | 1433 | U | 1434 | A | 1436 | U | 1437 | G | 1438 | * | U | 1272 | G | 1273 | A | 1275 | U | 1276 | G | 1277 | G | 1278 | cWW | ntSW | tWH | tHS | ncWWa | cWW | ncSW | cWW | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUGUGAUG*UGCAUGG | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGUGAU*GCAUG | 3 |
Release history
| Release | 4.7 |
|---|---|
| Date | 2026-02-25 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Heat map statistics
- Min 0.09 | Avg 0.07 | Max 0.12
Coloring options: