Motif J3_00008.1 Version J3_00008.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-11 | 2-12 | 6-7 | 8-9 | 10-12 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_5TBW_063 | 5TBW | 0.0000 | 3 | 1 | LSU rRNA | A | 1091 | C | 1092 | A | 1093 | U | 1096 | G | 1097 | A | 1098 | * | U | 986 | U | 987 | * | A | 1062 | G | 1063 | A | 1064 | G | 1066 | U | 1067 | cWW | ntWW | ncWW | cWW | cWW | csS |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UU*AGAAGU*ACAUUUGA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
*GAAG*CAUUUG | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-cSS-F-F-F-F-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: