Motif J3_11934.1 Version J3_11934.1 of this group appears in releases 3.2 to 3.17

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7		8	break		9		10		11	break		12		13	1-13	6-10	8-9	11-12
1	J3_5J7L_003	5J7L	0.1300	1	AA	SSU rRNA	U	717	A	718	C	719	C	720	G	721	G	722	G	724	G	725	*	C	732	G	733	G	734	*	U	672	A	673	cWW	tWW	cWW	cWW
2	J3_1G1X_004	1G1X	0.0000	1	J+I	16S RIBOSOMAL RNA	C	717	G	718	C	719	C	720	G	721	A	722	G	724	G	725	*	C	732	A	733	G	734	*	U	672	G	673	cWW	tWW	cWW	cWW
3	J3_1G1X_002	1G1X	0.0964	1	E+D	16S RIBOSOMAL RNA	C	717	G	718	C	719	C	720	G	721	A	722	G	724	G	725	*	C	732	A	733	G	734	*	U	672	G	673	cWW	tWW	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
UGCGCCGAUGGCAG	2
UAUACCGGUGGCGG	1

Non-Watson-Crick part of the motif

Sequence	Counts
GCCGAUGA	2
ACCGGUGG	1

Release history

Release	3.2	3.3	3.4	3.5	3.6	3.7	3.8	3.9	3.10	3.11	3.12	3.13	3.14	3.15	3.16	3.17
Date	2018-02-09	2018-03-08	2018-04-06	2018-05-04	2018-06-01	2018-06-29	2018-07-27	2018-08-24	2018-09-21	2018-10-19	2018-11-16	2018-12-14	2019-01-11	2019-02-08	2019-03-08	2019-04-05
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
Basepair signature: cWW-F-cWW-F-F-tWW-F-cWW-F
Heat map statistics: Min 0.10 | Avg 0.08 | Max 0.15

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Coloring options: Nucleotide numbers

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