Motif J3_18647.1 Version J3_18647.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | break | 10 | 11 | 12 | 1-12 | 2-6 | 5-9 | 5-10 | 7-8 | 7-11 | 9-10 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8P9A_063 | 8P9A | 0.0000 | 2 | AR | LSU rRNA | A | 2930 | C | 2931 | U | 2932 | A | 2933 | A | 2934 | U | 2935 | A | 2936 | * | U | 2886 | C | 2889 | * | G | 2914 | U | 2915 | U | 2916 | cWW | tWW | cSs | tSs | cWW | cHW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUC*GUU*ACUAAUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU*U*CUAAU | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tWW-cHW-F-cWW-tSS-F-cSS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: