Motif J3_19893.1 Version J3_19893.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | break | 17 | 18 | 19 | 1-19 | 6-17 | 7-15 | 8-14 | 9-13 | 11-12 | 16-17 | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_4V9F_018 | 4V9F | 0.0000 | 2 | 0 | LSU rRNA | G | 2421 | U | 2422 | C | 2423 | U | 2424 | G | 2426 | C | 2427 | G | 2428 | A | 2429 | A | 2430 | C | 2431 | C | 2432 | * | G | 2459 | A | 2460 | U | 2461 | G | 2462 | C | 2464 | * | G | 2316 | C | 2317 | C | 2318 | cWW | ntWS | tHh | tHW | cBW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GCC*GUCUAGCGAACC*GAUGAC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
C*UCUAGCGAAC*AUGA | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-cWW-F-F-tHH-F-tHW-F-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: