#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4 5 6break 7 8 9 10 11break 12 131-132-103-95-86-79-119-1211-12
1 J3_8VTW_0098VTW0.288011A LSU rRNAG2805G2807U2808A2809A2810G2811*C2889G2891A2892G2893G2894*C2789C2791cWWncWBtWHtHScWWntSscWW
2 J3_7A0S_0127A0S0.00001X LSU rRNAG2781G2782U2783A2784A2785G2786*C2864G2865A2866G2867G2868*C2769C2771cWWntWWtWHtHScWWncSstSscWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAC*GGUAAG*CGAGG2
Non-Watson-Crick part of the motif
SequenceCounts
A*GUAA*GAG2

Release history

Release3.87
Date2024-08-14
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-cWW-tSS-tWH-F-F-tHS-cWW
    Heat map statistics
    Min 0.29 | Avg 0.14 | Max 0.29
    Help

    Coloring options:

    J3_8VTW_009:J3_8VTW_009 = 0J3_8VTW_009:J3_7A0S_012 = 0.288J3_7A0S_012:J3_8VTW_009 = 0.288J3_7A0S_012:J3_7A0S_012 = 0J3_8VTW_009J3_7A0S_012Discrepancy0.000.050.100.150.200.25
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