Motif J3_44792.1 Version J3_44792.1 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 19 | 1-9 | 1-19 | 3-4 | 10-18 | 11-17 | 12-16 | 14-15 | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4V9F_018 | 4V9F | 0.0000 | 2 | 0 | LSU rRNA | G | 2316 | C | 2317 | C | 2318 | * | G | 2421 | U | 2422 | C | 2423 | U | 2424 | G | 2426 | C | 2427 | G | 2428 | A | 2429 | A | 2430 | C | 2431 | C | 2432 | * | G | 2459 | A | 2460 | U | 2461 | G | 2462 | C | 2464 | ntSW | cWW | cWW | tHh | tHW | cBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCC*GUCUAGCGAACC*GAUGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*UCUAGCGAAC*AUGA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-tHH-cWW-tHW-F-F-cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: