Motif J3_55094.1 Version J3_55094.1 of this group appears in releases 4.0 to 4.0
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | break | 8 | 9 | 10 | 1-10 | 2-9 | 5-6 | 7-8 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_4W90_002 | 4W90 | 0.0000 | 0 | C | cyclic di-AMP riboswitch | U | 7 | U | 8 | A | 9 | A | 10 | U | 11 | * | A | 22 | G | 23 | * | U | 111 | A | 112 | A | 113 | cWW | ntSW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UUAAU*AG*UAA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UAA**A | 1 |
Release history
Release | 4.0 |
---|---|
Date | 2025-08-13 |
Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-cWW-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: