Motif J3_67192.1 Version J3_67192.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 18 | 19 | 20 | 21 | break | 22 | 23 | 24 | 25 | 1-25 | 3-23 | 15-16 | 21-22 | |||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_8C3A_084 | 8C3A | 0.0000 | 3 | CM | SSU rRNA | U | 210 | A | 211 | G | 212 | A | 213 | U | 214 | A | 217 | A | 218 | A | 219 | A | 220 | U | 221 | C | 222 | A | 223 | A | 224 | U | 225 | G | 226 | * | C | 235 | U | 236 | C | 237 | U | 239 | U | 240 | G | 241 | * | C | 248 | A | 249 | U | 250 | A | 251 | cWW | tSH | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UAGAUAAAAAAUCAAUG*CUCUUUG*CAUA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGAUAAAAAAUCAAU*UCUUU*AU | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-tSH-F-cWW-F-F-F-F-F-F-F-F-F-F-cWW-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: