Motif J3_67213.1 Version J3_67213.1 of this group appears in releases 3.80 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | break | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 1-20 | 7-8 | 13-14 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8C3A_042 | 8C3A | 0.0000 | 0 | CM | SSU rRNA | U | 1267 | U | 1268 | C | 1269 | U | 1270 | U | 1271 | A | 1272 | G | 1273 | * | C | 1312 | G | 1313 | A | 1314 | G | 1315 | A | 1316 | C | 1317 | * | G | 1405 | C | 1406 | A | 1407 | A | 1408 | U | 1409 | A | 1410 | A | 1411 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUCUUAG*CGAGAC*GCAAUAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCUUA*GAGA*CAAUA | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: