#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10break 11 12 13 14 151-152-63-134-126-147-810-11
1 J3_4V88_0834V880.00003A6 SSU rRNAU1407G1408G1409A1410A1411G1412U1415*A1336A1337C1338*G1386G1387A1388C1389A1391cWWtWHtSWtWScWWcWWcWW
2 J3_8C3A_0868C3A0.21173CM SSU rRNAU1393G1394G1395A1396A1397G1398U1401*A1321A1322C1323*G1372G1373A1374C1375A1377cWWtWHtSWtWScWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAC*GGACUA*UGGAAGUUU2
Non-Watson-Crick part of the motif
SequenceCounts
A*GACU*GGAAGUU2

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusNew id, no parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tWH-cWW-tSW-tWS-F-cWW-cWW-F
    Heat map statistics
    Min 0.21 | Avg 0.11 | Max 0.21
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.4542 s