Motif J3_74074.1 Version J3_74074.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 2-3 | 8-12 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4LFB_012 | 4LFB | 0.0000 | 1 | A | SSU rRNA | U | 672 | G | 673 | * | C | 717 | G | 718 | C | 719 | C | 720 | G | 721 | A | 722 | G | 724 | G | 725 | * | C | 732 | A | 733 | G | 734 | cWW | cWW | tWW | cWW |
| 2 | J3_8B0X_003 | 8B0X | 0.0972 | 1 | A | SSU rRNA | U | 672 | A | 673 | * | U | 717 | A | 718 | C | 719 | C | 720 | G | 721 | G | 722 | G | 724 | G | 725 | * | C | 732 | G | 733 | G | 734 | cWW | cWW | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*CGCCGAUGG*CAG | 1 |
| UA*UACCGGUGG*CGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GCCGAUG*A | 1 |
| *ACCGGUG*G | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: