Motif J3_75962.1 Version J3_75962.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | break | 8 | 9 | 1-9 | 2-4 | 5-6 | 7-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8P9A_087 | 8P9A | 0.0000 | 0 | AR | LSU rRNA | U | 1641 | A | 1642 | A | 1643 | C | 1644 | U | 1645 | * | A | 1810 | G | 1811 | * | C | 1631 | A | 1632 | ncWW | cWW | cWW | |
| 2 | J3_4WFL_002 | 4WFL | 0.7189 | 0 | A | LSRP RNA | U | 34 | G | 35 | U | 36 | A | 37 | C | 38 | * | G | 58 | G | 59 | * | C | 15 | G | 16 | cWW | ntSH | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CA*UAACU*AG | 1 |
| CG*UGUAC*GG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AAC* | 1 |
| *GUA* | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-F-cWW-F-F-cWW
- Heat map statistics
- Min 0.72 | Avg 0.36 | Max 0.72
Coloring options: