Motif J3_76043.6 Version J3_76043.6 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-4 | 1-11 | 2-3 | 2-10 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8CRE_083 | 8CRE | 0.0922 | 0 | CM | SSU rRNA | U | 1278 | G | 1279 | * | U | 1288 | G | 1289 | U | 1290 | C | 1291 | * | G | 1303 | A | 1304 | U | 1305 | A | 1306 | A | 1307 | cWW | cWW | ntsS | cWW | |
| 2 | J3_9PN5_040 | 9PN5 | 0.0777 | 0 | B5 | SSU rRNA | U | 1293 | G | 1294 | * | U | 1303 | G | 1304 | U | 1305 | C | 1306 | * | G | 1318 | A | 1319 | U | 1320 | A | 1321 | A | 1322 | cWW | cWW | ntsS | cWW | |
| 3 | J3_9H3G_040 | 9H3G | 0.0000 | 0 | h1 | SSU rRNA | U | 1294 | G | 1295 | * | U | 1304 | G | 1305 | PSU | 1306 | C | 1307 | * | G | 1319 | U | 1320 | U | 1321 | A | 1322 | A | 1323 | cWW | cWW | tsS | cWW | |
| 4 | J3_8GLP_047 | 8GLP | 0.0782 | 0 | S2 | SSU rRNA | U | 1350 | G | 1351 | * | U | 1360 | G | 1361 | U | 1362 | C | 1363 | * | G | 1375 | A | 1376 | U | 1377 | A | 1378 | A | 1379 | ntHS | cWW | cWW | tsS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*UGUC*GAUAA | 3 |
| UG*UG(PSU)C*GUUAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GU*AUA | 3 |
| *G(PSU)*UUA | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-cWW-tSS-F-F-F-F-cWW
- Heat map statistics
- Min 0.08 | Avg 0.06 | Max 0.10
Coloring options: