#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6break 7 8 91-94-56-7
1 J3_8C3A_0438C3A0.15532CM SSU rRNAG1372G1373A1374C1375*G1398U1401*A1321A1322C1323cWWcWWcWW
2 J3_4V88_0404V880.00002A6 SSU rRNAG1386G1387A1388C1389*G1412U1415*A1336A1337C1338cWWcWWcWW
3 J3_5J7L_0105J7L0.84622AA SSU rRNAA1155G1156A1157C1158*G1181G1184*U1116A1117U1118cWWcWWcWW
4 J3_4LFB_0084LFB0.88272A SSU rRNAG1155G1156A1157C1158*G1181G1184*C1116G1117C1118cWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAC*GGAC*GUUU2
UAU*AGAC*GGUG1
CGC*GGAC*GGAG1
Non-Watson-Crick part of the motif
SequenceCounts
A*GA*UU2
A*GA*GU1
G*GA*GA1

Release history

Release3.803.813.823.833.843.853.863.873.883.893.90
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-06
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-F-F-F-cWW-cWW
    Heat map statistics
    Min 0.16 | Avg 0.49 | Max 0.95
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