Motif J3_84856.1 Version J3_84856.1 of this group appears in releases 4.1 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 1-16 | 9-10 | 14-15 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4V8Q_037 | 4V8Q | 0.0000 | 5 | BY | tmRNA | G | 7 | A | 8 | A | 9 | C | 11 | U | 16 | C | 17 | G | 18 | A | 19 | C | 20 | * | G | 58 | G | 59 | A | 60 | C | 61 | G | 62 | * | C | 78 | C | 79 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAACGGUCUCGAC*GGACG*CC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAACGGUCUCGA*GAC* | 1 |
Release history
| Release | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 |
|---|---|---|---|---|---|---|---|
| Date | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-F-F-F-cWW-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: