Motif J3_88257.1 Version J3_88257.1 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 3-12 | 5-6 | 7-10 | 8-9 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_6JQ5_001 | 6JQ5 | 0.0000 | 3 | A+B | Hatchet ribozyme | G | 27 | U | 28 | G | 29 | G | 30 | G | 31 | * | C | 64 | A | 65 | A | 67 | * | U | 70 | U | 71 | A | 73 | A | 74 | A | 75 | C | 77 | cWW | tSW | cWW | cHW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGGG*CAGA*UUAAAACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGG*AG*UAAAAC | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-tSW-F-F-cWW-cHW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: