Motif J3_92123.1 Version J3_92123.1 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 19 | 1-19 | 2-18 | 3-17 | 5-6 | 12-16 | 14-15 | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_9SUM_030 | 9SUM | 0.0000 | 1 | CA | SSU rRNA | A | 851 | U | 852 | C | 853 | A | 854 | G | 855 | * | C | 897 | U | 898 | A | 899 | A | 900 | C | 901 | U | 902 | A | 903 | U | 905 | G | 906 | * | C | 913 | A | 914 | U | 915 | U | 916 | U | 917 | cWW | cwW | cWW | cWW | tWW | cWW |
| 2 | J3_8CRE_076 | 8CRE | 0.0631 | 1 | CM | SSU rRNA | A | 866 | U | 867 | C | 868 | A | 869 | G | 870 | * | C | 912 | U | 913 | A | 914 | A | 915 | C | 916 | U | 917 | A | 918 | U | 920 | G | 921 | * | C | 928 | A | 929 | U | 930 | U | 931 | U | 932 | cWW | cwW | cWW | cWW | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUCAG*CUAACUACUG*CAUUU | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCA*UAACUACU*AUU | 2 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-cWW-F-tWW-cWW-cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.06 | Avg 0.03 | Max 0.06
Coloring options: