Motif J3_93902.1 Version J3_93902.1 of this group appears in releases 3.93 to 3.93
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | break | 10 | 11 | 1-11 | 4-8 | 5-6 | 6-7 | 9-10 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_9FN2_001 | 9FN2 | 0.0000 | 1 | A | SAMURI-SAM | C | 6 | A | 7 | U | 8 | G | 9 | G | 10 | C | 11 | * | G | 36 | U | 37 | C | 38 | * | G | 51 | G | 53 | cWW | ntWS | ncSH | cWW | ncWW |
| 2 | J3_9FN2_002 | 9FN2 | 0.3788 | 1 | B | SAMURI-SAM | C | 6 | A | 7 | U | 8 | G | 9 | G | 10 | C | 11 | * | G | 36 | U | 37 | C | 38 | * | G | 51 | G | 53 | cWW | tWS | ncSH | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUGGC*GUC*G(A1IEA)G | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGG*U*(A1IEA) | 2 |
Release history
| Release | 3.93 |
|---|---|
| Date | 2025-01-29 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-cWW-F-tWS-F-cWW
- Heat map statistics
- Min 0.38 | Avg 0.19 | Max 0.38
Coloring options: