Motif J4_20770.1 Version J4_20770.1 of this group appears in releases 3.3 to 3.47

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name for chain		1		2		3		4	break		5		6		7		8		9	break		10		11		12		13		14	break		15		16		17		18		19		20		21		22		23		24		25	1-25	3-6	4-5	9-10	14-15
1	J4_4IOA_002	4IOA	0.0000	0	X	LSU rRNA	C	611	G	612	A	613	G	614	*	C	635	G	636	G	637	A	638	G	639	*	C	646	G	647	A	648	G	649	U	650	*	G	659	G	660	C	661	G	662	G	663	C	664	A	665	U	666	U	667	A	668	G	669	cWW	tSs	cWW	cWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CGAGCGGAGCGAGU*GGCGGCAUUAG	1

Non-Watson-Crick part of the motif

Sequence	Counts
GAGGAGAG*GCGGCAUUA	1

Release history

Release	3.2	3.3	3.4	3.5	3.6	3.7	3.8	3.9	3.10	3.11	3.12	3.13	3.14	3.15	3.16	3.17	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25	3.26	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36	3.37	3.38	3.39	3.40	3.41	3.42	3.43	3.44	3.45	3.46	3.47
Date	2018-02-09	2018-03-08	2018-04-06	2018-05-04	2018-06-01	2018-06-29	2018-07-27	2018-08-24	2018-09-21	2018-10-19	2018-11-16	2018-12-14	2019-01-11	2019-02-08	2019-03-08	2019-04-05	2019-05-03	2019-05-31	2019-06-28	2019-07-26	2019-08-23	2019-09-19	2019-10-16	2019-11-13	2019-12-11	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16	2020-10-14	2020-11-11	2020-12-09	2021-01-06	2021-02-03	2021-03-03	2021-03-31	2021-04-28	2021-05-26	2021-06-23	2021-07-21
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (1)
Basepair signature: cWW-F-F-F-F-F-F-F-cWW-F-F-F-F-F-F-tSS-F-cWW-cWW-F
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

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Coloring options: Nucleotide numbers

Motif J4_20770.1 Version J4_20770.1 of this group appears in releases 3.3 to 3.47 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif J4_20770.1 Version J4_20770.1 of this group appears in releases 3.3 to 3.47

Download

Csv

Json