#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7break 8 9 10 11 12 13break 14 151-152-114-54-94-106-96-107-813-14
1 J4_5WT1_0025WT10.51361C tRNAG7U8A9G10*C25A26C27*G43G44U45G46C48G49*C65C66cWWcWWcHWcWWcWWcWW
2 J4_1U0B_0011U0B0.00000tRNA junctionA tRNAU7U8A9A10*U25A26G27*U43C44U45A46G48U49*A65A66cWWcSscWWcHWncWBcWWcWW
3 J4_2IY5_0012IY50.46971T tRNAG7U8A9G10*C25A26U27*A43G44U45G46C48C49*G65C66cWWcWWncHWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUAG*CAC*GGUGUCG*CC1
UUAA*UAG*UCUAGU*AA1
GUAG*CAU*AGUGUCC*GC1
Non-Watson-Crick part of the motif
SequenceCounts
UA*A*GUGUC*2
UA*A*CUAG*1

Release history

Release3.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.94
Date2019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-09-142022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-062024-12-042025-01-012025-01-292025-02-26
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • tRNA junction (1)
  • Basepair signature
    cWW-F-cWW-F-cWW-cHW-F-F-F-cWW-F
    Heat map statistics
    Min 0.47 | Avg 0.33 | Max 0.52
    Help

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