#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 7 8 9break 10 11 12 13 14break 15 16 171-121-172-163-45-126-117-89-1013-1614-15
1 J4_4LFB_0024LFB0.00000A SSU rRNAG142A143G144*C178A179U180G181U182G183*C194A195A196A197G198*C219G220C221tsScWWcWWcWWtWHtWHcSHcWWtSscWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAG*CAUGUG*CAAAG*CGC1
Non-Watson-Crick part of the motif
SequenceCounts
A*AUGU*AAA*G1

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.17
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-05
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (1)
  • Basepair signature
    cWW-tWH-cWW-tWH-cWW-tSS-cSH-tSS-cWW-cWW
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
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