Motif J4_51436.1 Version J4_51436.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 1-17 | 3-4 | 5-10 | 6-9 | 7-8 | 13-14 | 15-16 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_1QF6_001 | 1QF6 | 0.0000 | 1 | tRNA junction | B | tRNA | A | 7 | A | 9 | G | 10 | * | C | 25 | A | 26 | G | 27 | C | 28 | * | G | 42 | A | 43 | A | 44 | G | 45 | G7M | 46 | U | 47 | C | 48 | G | 49 | * | U | 65 | U | 66 | cWW | cWW | ncWw | cWW | cWW | ncSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAG*CAGC*GAAG(G7M)UCG*UU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UA*AG*AAG(G7M)UC* | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tRNA junction (1)
- Basepair signature
- cWW-F-cWW-cWW-F-F-F-cWW-F-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: