Motif J4_55018.1 Version J4_55018.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 1-14 | 2-5 | 3-4 | 7-8 | 9-12 | 10-11 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_4RUM_001 | 4RUM | 0.0000 | 0 | A | NiCo riboswitch | C | 16 | A | 17 | G | 18 | * | C | 44 | G | 45 | G | 46 | G | 47 | * | C | 60 | A | 61 | A | 62 | * | U | 85 | G | 86 | G | 87 | G | 88 | cWW | tHS | cWW | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAG*CGGG*CAA*UGGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GG*A*GG | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: