Motif J4_78156.1 Version J4_78156.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | break | 14 | 15 | 1-15 | 3-6 | 4-5 | 7-10 | 8-9 | 13-14 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_3ICQ_001 | 3ICQ | 0.0000 | 3 | tRNA junction | E | RNA (62-MER) | U | 7 | A | 9 | A | 10 | C | 11 | * | G | 24 | C | 25 | G | 26 | C | 27 | * | G | 43 | A | 44 | G | 45 | G | 46 | C | 49 | * | G | 65 | A | 66 | cWW | ncWWa | cWW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAAC*GCGC*GAGGUCC*GA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAA*CG*AGGUC* | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tRNA junction (1)
- Basepair signature
- cWW-F-cWW-F-cWW-F-F-F-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: