#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6break 7 8break 9 10break 11 121-124-56-78-910-11
1 J5_3ADD_0013ADD0.00000CSelenocysteine transfer RNAC7C8A9C10*G25G26*C44G45*C48G50*C64G66cWWcWWcWWcWWcWW
2 J5_3AM1_0013AM10.46670BASL-truncated tRNAG9U10A11C12*G29G30*C39G40*C55G56*C70C71cWWcWWcWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCAC*GG*CG*CG*CG1
GUAC*GG*CG*CG*CC1
Non-Watson-Crick part of the motif
SequenceCounts
CA****1
UA****1

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.98
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-09-142022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-062024-12-042025-01-012025-01-292025-02-262025-03-262025-04-232025-05-212025-06-18
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-cWW-F-cWW-cWW-cWW
    Heat map statistics
    Min 0.47 | Avg 0.23 | Max 0.47
    Help

    Coloring options:

    J5_3ADD_001:J5_3ADD_001 = 0J5_3ADD_001:J5_3AM1_001 = 0.4667J5_3AM1_001:J5_3ADD_001 = 0.4667J5_3AM1_001:J5_3AM1_001 = 0J5_3ADD_001J5_3AM1_001Discrepancy0.000.100.200.300.40
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