Motif J6_82871.1 Version J6_82871.1 of this group appears in releases 3.2 to 3.47
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | break | 18 | 19 | 20 | 21 | 22 | break | 23 | 24 | 25 | 26 | 27 | break | 28 | 29 | 30 | 31 | 32 | 33 | 34 | 35 | 1-35 | 2-3 | 4-8 | 6-9 | 6-35 | 7-8 | 7-34 | 8-10 | 10-33 | 13-21 | 13-31 | 14-20 | 15-29 | 16-19 | 17-18 | 20-31 | 21-32 | 22-23 | 24-31 | 24-32 | 26-29 | 27-28 | |||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J6_4IOA_001 | 4IOA | 0.0000 | 1 | X | G | 44 | C | 45 | * | G | 156 | G | 157 | A | 158 | A | 159 | C | 160 | * | G | 191 | G | 192 | A | 193 | G | 194 | A | 195 | A | 196 | G | 197 | A | 198 | A | 199 | G | 201 | * | C | 208 | G | 209 | A | 210 | U | 211 | U | 212 | * | A | 239 | U | 240 | C | 241 | A | 242 | G | 243 | * | C | 439 | U | 440 | A | 441 | A | 442 | A | 443 | U | 444 | A | 445 | C | 446 | cWW | cWW | ncWB | cWW | csS | cWW | cSs | ncsS | tHW | csS | ncWB | cSs | tHW | ntHS | cWW | tWW | tWW | cWW | ncSs | ncSs | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GC*GGAAC*GGAGAAGAAAG*CGAUU*AUCAGCUAAAUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GAA*GAGAAGAAA*GAU*UCAUAAAUA | 1 |
Release history
| Release | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-02-09 | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cSS-cWW-cSS-tHW-F-F-F-F-cWW-cSS-cSS-cWW-tHW-F-cWW-tWW-F-tWW-F-tHS-cWW-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: