Motif J7_30073.1 Version J7_30073.1 of this group appears in releases 3.54 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 19 | break | 20 | 21 | 22 | 23 | break | 24 | 25 | 26 | 27 | 28 | 29 | break | 30 | 31 | break | 32 | 33 | 1-33 | 2-28 | 5-10 | 6-7 | 8-9 | 10-24 | 13-21 | 14-15 | 19-20 | 23-24 | 29-30 | 31-32 | |||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J7_7RQB_001 | 7RQB | 0.0000 | 2 | 1A | LSU rRNA | A | 8 | U | 9 | G | 10 | G | 11 | U | 12 | A | 13 | A | 14 | G | 15 | * | U | 525 | A | 526 | C | 527 | A | 528 | A | 529 | C | 531 | * | G | 2018 | A | 2019 | A | 2020 | U | 2022 | G | 2023 | * | C | 2040 | U | 2041 | A | 2042 | C | 2043 | * | G | 2625 | C | 2626 | G | 2627 | C | 2628 | A | 2629 | G | 2630 | * | C | 2788 | C | 2789 | * | G | 2894 | U | 2895 | ncWW | tWW | ntWH | cSH | cWW | ntSs | tHW | cWW | cWW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAGCCGU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGGUAA*ACAAG*AACU*UA*CGCA | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-09-14 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 | 2023-12-06 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tWW-cWW-F-F-cWW-F-cSH-F-cWW-F-F-F-cWW-F-F-F-tHW-cWW-cWW-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: