#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12 13 14 15break 16 17 18 19 20break 21 22 23 24break 25 26 27 28 29 30break 31 32break 33 341-343-295-106-78-910-2513-2215-1620-2124-2530-3132-33
1 J7_5J7L_0035J7L0.00001DA LSU rRNAC8G9A10C11U12A13A14G15*U525A526C527A528A529G530C531*G2018A2019A2020U2022C2023*G2040U2041A2042C2043*G2625C2626G2627C2628U2629G2630*C2788C2789*G2894G2895cWWtHWntWHcSHcWWtSstHWcWWcWWcWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUGCCGG1
Non-Watson-Crick part of the motif
SequenceCounts
GACUAA*ACAAG*AACU*UA*CGCU1

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.97
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-09-142022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-062024-12-042025-01-012025-01-292025-02-262025-03-262025-04-232025-05-21
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (1)
  • Basepair signature
    cWW-F-cWW-tHW-F-cWW-F-cSH-F-cWW-F-F-tSS-cWW-F-F-F-tHW-F-cWW-cWW-F-F-F
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
    Help

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