NR_3.0_97519.46

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4Y4O\|1\|2A (rep)	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	2015-03-18
2	4Y4O\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	2015-03-18
3	5HCQ\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
4	4V9H\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-ray diffraction	2.86	2014-07-09
5	5FDU\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2016-01-27
6	5FDV\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-01-27
7	5HCQ\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
8	4V8I\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2014-07-09
9	5FDV\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-01-27
10	5FDU\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2016-01-27
11	4WPO\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
12	5IBB\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
13	5IB7\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
14	5E81\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-ray diffraction	2.95	2016-01-27
15	6CAE\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-04-18
16	4V8I\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2014-07-09
17	6CFL\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-ray diffraction	2.6	2018-03-07
18	5IBB\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
19	6CFL\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-ray diffraction	2.6	2018-03-07
20	6CAE\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-04-18
21	5E81\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-ray diffraction	2.95	2016-01-27
22	5IB7\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
23	5HCR\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
24	6CFK\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-ray diffraction	2.7	2018-03-07
25	4WPO\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
26	4Z8C\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
27	5NDK\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	2017-12-13
28	4WSD\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
29	6CFJ\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2018-03-07
30	5W4K\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2017-08-30
31	6CFK\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-ray diffraction	2.7	2018-03-07
32	5HCR\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
33	4WQU\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	2015-01-28
34	5J4B\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
35	4V8D\|1\|BA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
36	1VY4\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
37	6OF1\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	2019-04-17
38	5J4B\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
39	4WSD\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
40	5NDK\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	2017-12-13
41	5J8B\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.6	2016-05-25
42	4V9R\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
43	5HD1\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
44	5WIS\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2018-02-14
45	1VY4\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
46	5J4C\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
47	4LNT\|1\|YA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
48	4Z8C\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
49	4WQF\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	2015-01-28
50	5J4C\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
51	4V9R\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
52	4W2G\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
53	5HCP\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
54	4W2H\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
55	4V8D\|1\|DA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
56	5HD1\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
57	5HCP\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
58	4W2G\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
59	4V8G\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
60	4V8B\|1\|BA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
61	5W4K\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2017-08-30
62	6OF1\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	2019-04-17
63	4V8G\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
64	6CFJ\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2018-03-07
65	4Z3S\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
66	4W2H\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
67	4Z3S\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
68	4W2I\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
69	6ND5\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	2019-03-20
70	4W2I\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
71	5HAU\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
72	5HAU\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
73	4LNT\|1\|RA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
74	5WIS\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2018-02-14
75	4W2F\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
76	6ND5\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	2019-03-20
77	4WQU\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	2015-01-28
78	4W2F\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
79	4WQF\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	2015-01-28
80	4V8B\|1\|DA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
81	6O97\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	2019-04-17
82	1VY7\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
83	4Y4P\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
84	4WQY\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
85	4Y4P\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
86	1VY5\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
87	5WIT\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-02-14
88	1VY7\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
89	1VY5\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
90	5DOY\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
91	5DOY\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
92	6O97\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	2019-04-17
93	5WIT\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-02-14
94	1VY6\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
95	6ND6\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	2019-02-20
96	1VY6\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
97	4WQY\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
98	4V90\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Thermus thermophilus Ribosome	X-ray diffraction	2.95	2014-07-09
99	6ND6\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	2019-02-20
100	4V51\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
101	6UO1\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	2019-11-27
102	4V51\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
103	5F8K\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
104	6UO1\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	2019-11-27
105	4W2E\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2014-10-01
106	4V7Y\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2014-07-09
107	4V7Y\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2014-07-09
108	5F8K\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
109	4V7L\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
110	4V7X\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2014-07-09
111	4V7X\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2014-07-09
112	4V67\|1\|BA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
113	4V7L\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
114	4V7W\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2014-07-09
115	4V7W\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2014-07-09
116	4V67\|1\|DA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
117	6GSJ\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	2018-07-04
118	6GSJ\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	2018-07-04

Release history

Release	3.102	3.103	3.104	3.105
Date	2019-11-27	2019-12-04	2019-12-11	2019-12-18

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.0_97519.46	NR_3.0_97519.45	3.102	(116) 1VY4\|1\|BA, 1VY4\|1\|DA, 1VY5\|1\|BA, 1VY5\|1\|DA, 1VY6\|1\|BA, 1VY6\|1\|DA, 1VY7\|1\|BA, 1VY7\|1\|DA, 4LNT\|1\|RA, 4LNT\|1\|YA, 4V51\|1\|BA, 4V51\|1\|DA, 4V67\|1\|BA, 4V67\|1\|DA, 4V7L\|1\|BA, 4V7L\|1\|DA, 4V7W\|1\|BA, 4V7W\|1\|DA, 4V7X\|1\|BA, 4V7X\|1\|DA, 4V7Y\|1\|BA, 4V7Y\|1\|DA, 4V8B\|1\|BA, 4V8B\|1\|DA, 4V8D\|1\|BA, 4V8D\|1\|DA, 4V8G\|1\|BA, 4V8G\|1\|DA, 4V8I\|1\|BA, 4V8I\|1\|DA, 4V90\|1\|BA, 4V9H\|1\|BA, 4V9R\|1\|BA, 4V9R\|1\|DA, 4W2E\|1\|A, 4W2F\|1\|BA, 4W2F\|1\|DA, 4W2G\|1\|BA, 4W2G\|1\|DA, 4W2H\|1\|BA, 4W2H\|1\|DA, 4W2I\|1\|BA, 4W2I\|1\|DA, 4WPO\|1\|AA, 4WPO\|1\|CA, 4WQF\|1\|AA, 4WQF\|1\|CA, 4WQU\|1\|AA, 4WQU\|1\|CA, 4WQY\|1\|AA, 4WQY\|1\|CA, 4WSD\|1\|14, 4WSD\|1\|1H, 4Y4O\|1\|1A, 4Y4O\|1\|2A, 4Y4P\|1\|1A, 4Y4P\|1\|2A, 4Z3S\|1\|1A, 4Z3S\|1\|2A, 4Z8C\|1\|1A, 4Z8C\|1\|2A, 5DOY\|1\|1A, 5DOY\|1\|2A, 5E81\|1\|14, 5E81\|1\|1H, 5F8K\|1\|1A, 5F8K\|1\|2A, 5FDU\|1\|1A, 5FDU\|1\|2A, 5FDV\|1\|1A, 5FDV\|1\|2A, 5HAU\|1\|1A, 5HAU\|1\|2A, 5HCP\|1\|1A, 5HCP\|1\|2A, 5HCQ\|1\|1A, 5HCQ\|1\|2A, 5HCR\|1\|1A, 5HCR\|1\|2A, 5HD1\|1\|1A, 5HD1\|1\|2A, 5IB7\|1\|14, 5IB7\|1\|1H, 5IBB\|1\|14, 5IBB\|1\|1H, 5J4B\|1\|1A, 5J4B\|1\|2A, 5J4C\|1\|1A, 5J4C\|1\|2A, 5J8B\|1\|A, 5NDK\|1\|14, 5NDK\|1\|1H, 5W4K\|1\|1A, 5W4K\|1\|2A, 5WIS\|1\|1A, 5WIS\|1\|2A, 5WIT\|1\|1A, 5WIT\|1\|2A, 6CAE\|1\|1A, 6CAE\|1\|2A, 6CFJ\|1\|1A, 6CFJ\|1\|2A, 6CFK\|1\|1A, 6CFK\|1\|2A, 6CFL\|1\|1A, 6CFL\|1\|2A, 6GSJ\|1\|14, 6GSJ\|1\|1H, 6ND5\|1\|1A, 6ND5\|1\|2A, 6ND6\|1\|1A, 6ND6\|1\|2A, 6O97\|1\|1A, 6O97\|1\|2A, 6OF1\|1\|1A, 6OF1\|1\|2A	(2) 6UO1\|1\|1A, 6UO1\|1\|2A	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.0_97519.46	NR_3.0_97519.47	3.106	(118) 1VY4\|1\|BA, 1VY4\|1\|DA, 1VY5\|1\|BA, 1VY5\|1\|DA, 1VY6\|1\|BA, 1VY6\|1\|DA, 1VY7\|1\|BA, 1VY7\|1\|DA, 4LNT\|1\|RA, 4LNT\|1\|YA, 4V51\|1\|BA, 4V51\|1\|DA, 4V67\|1\|BA, 4V67\|1\|DA, 4V7L\|1\|BA, 4V7L\|1\|DA, 4V7W\|1\|BA, 4V7W\|1\|DA, 4V7X\|1\|BA, 4V7X\|1\|DA, 4V7Y\|1\|BA, 4V7Y\|1\|DA, 4V8B\|1\|BA, 4V8B\|1\|DA, 4V8D\|1\|BA, 4V8D\|1\|DA, 4V8G\|1\|BA, 4V8G\|1\|DA, 4V8I\|1\|BA, 4V8I\|1\|DA, 4V90\|1\|BA, 4V9H\|1\|BA, 4V9R\|1\|BA, 4V9R\|1\|DA, 4W2E\|1\|A, 4W2F\|1\|BA, 4W2F\|1\|DA, 4W2G\|1\|BA, 4W2G\|1\|DA, 4W2H\|1\|BA, 4W2H\|1\|DA, 4W2I\|1\|BA, 4W2I\|1\|DA, 4WPO\|1\|AA, 4WPO\|1\|CA, 4WQF\|1\|AA, 4WQF\|1\|CA, 4WQU\|1\|AA, 4WQU\|1\|CA, 4WQY\|1\|AA, 4WQY\|1\|CA, 4WSD\|1\|14, 4WSD\|1\|1H, 4Y4O\|1\|1A, 4Y4O\|1\|2A, 4Y4P\|1\|1A, 4Y4P\|1\|2A, 4Z3S\|1\|1A, 4Z3S\|1\|2A, 4Z8C\|1\|1A, 4Z8C\|1\|2A, 5DOY\|1\|1A, 5DOY\|1\|2A, 5E81\|1\|14, 5E81\|1\|1H, 5F8K\|1\|1A, 5F8K\|1\|2A, 5FDU\|1\|1A, 5FDU\|1\|2A, 5FDV\|1\|1A, 5FDV\|1\|2A, 5HAU\|1\|1A, 5HAU\|1\|2A, 5HCP\|1\|1A, 5HCP\|1\|2A, 5HCQ\|1\|1A, 5HCQ\|1\|2A, 5HCR\|1\|1A, 5HCR\|1\|2A, 5HD1\|1\|1A, 5HD1\|1\|2A, 5IB7\|1\|14, 5IB7\|1\|1H, 5IBB\|1\|14, 5IBB\|1\|1H, 5J4B\|1\|1A, 5J4B\|1\|2A, 5J4C\|1\|1A, 5J4C\|1\|2A, 5J8B\|1\|A, 5NDK\|1\|14, 5NDK\|1\|1H, 5W4K\|1\|1A, 5W4K\|1\|2A, 5WIS\|1\|1A, 5WIS\|1\|2A, 5WIT\|1\|1A, 5WIT\|1\|2A, 6CAE\|1\|1A, 6CAE\|1\|2A, 6CFJ\|1\|1A, 6CFJ\|1\|2A, 6CFK\|1\|1A, 6CFK\|1\|2A, 6CFL\|1\|1A, 6CFL\|1\|2A, 6GSJ\|1\|14, 6GSJ\|1\|1H, 6ND5\|1\|1A, 6ND5\|1\|2A, 6ND6\|1\|1A, 6ND6\|1\|2A, 6O97\|1\|1A, 6O97\|1\|2A, 6OF1\|1\|1A, 6OF1\|1\|2A, 6UO1\|1\|1A, 6UO1\|1\|2A	(0)	(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	4V90\|1\|BA	Thermus thermophilus Ribosome	X-RAY DIFFRACTION	2.95	2901
2	4V9H\|1\|BA	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-RAY DIFFRACTION	2.86	2859
3	5J8B\|1\|A	Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.6	2874
4	4V7W\|1\|DA	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	2725
5	4V7W\|1\|BA	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	2725
6	4V7X\|1\|DA	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	2725
7	4V7X\|1\|BA	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	2725
8	4V7Y\|1\|BA	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	2725
9	4V7Y\|1\|DA	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	2725
10	4V51\|1\|DA	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	2772
11	4V51\|1\|BA	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	2772
12	4V7L\|1\|BA	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2800
13	4V7L\|1\|DA	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2800
14	4V67\|1\|BA	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	2879
15	4V67\|1\|DA	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	2879
16	4W2E\|1\|A	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	2873
17	4WQF\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	2848
18	4WQY\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	2848
19	4WQU\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	2868
20	5HAU\|1\|2A	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	2868
21	5HD1\|1\|2A	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	2790
22	5HCP\|1\|2A	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	2790
23	5HCR\|1\|2A	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2790
24	5HCQ\|1\|2A	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2790
25	4Z8C\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	2790
26	5F8K\|1\|1A	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2861
27	6CFL\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-RAY DIFFRACTION	2.6	2861
28	6CFK\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-RAY DIFFRACTION	2.7	2861
29	5FDV\|1\|1A	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2861
30	5FDU\|1\|1A	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	2861
31	4Y4O\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	2861
32	4V8G\|1\|DA	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2814
33	4V8G\|1\|BA	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2809
34	4V8I\|1\|BA	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	2827
35	4V8I\|1\|DA	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	2798
36	6CFL\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-RAY DIFFRACTION	2.6	2856
37	6CFK\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-RAY DIFFRACTION	2.7	2856
38	4Y4O\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	2856
39	5FDV\|1\|2A	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2857
40	5FDU\|1\|2A	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	2857
41	5F8K\|1\|2A	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2856
42	5HD1\|1\|1A	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	2746
43	5HCP\|1\|1A	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	2746
44	5HCR\|1\|1A	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2746
45	5HCQ\|1\|1A	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2746
46	4Z8C\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	2746
47	4WQF\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	2852
48	4WQY\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	2852
49	5HAU\|1\|1A	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	2872
50	4WQU\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	2872
51	4WPO\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	2872
52	4W2H\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	2822
53	4V9R\|1\|BA	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	2731
54	1VY6\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	2819
55	1VY4\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	2819
56	1VY5\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	2819
57	4W2G\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	2819
58	4W2F\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	2871
59	5WIT\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2860
60	5J4B\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2861
61	5J4C\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2860
62	5W4K\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2860
63	5WIS\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2860
64	4Y4P\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	2860
65	6CFJ\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2860
66	6ND6\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	2860
67	6O97\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	2860
68	6CAE\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2860
69	6OF1\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	2860
70	6ND5\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	2860
71	4Z3S\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	2860
72	5DOY\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	2860
73	4W2I\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	2822
74	1VY7\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	2819
75	5DOY\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
76	4W2H\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	2800
77	4W2I\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	2800
78	1VY7\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	2800
79	4V9R\|1\|DA	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	2714
80	1VY6\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	2800
81	1VY5\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	2800
82	1VY4\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	2800
83	4WPO\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	2868
84	4W2G\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	2800
85	4W2F\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	2800
86	4Z3S\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	2789
87	5WIT\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
88	5W4K\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2789
89	5WIS\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2789
90	4Y4P\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	2789
91	5J4C\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2789
92	5J4B\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
93	6CFJ\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2789
94	6ND6\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	2789
95	6O97\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	2789
96	6CAE\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
97	6OF1\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	2789
98	6ND5\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	2789
99	6UO1\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	2789
100	6UO1\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	2860
101	5IB7\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	2860
102	5IBB\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	2841
103	5E81\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-RAY DIFFRACTION	2.95	2888
104	6GSJ\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	2850
105	5NDK\|1\|1H	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	2912
106	4WSD\|1\|1H	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	2912
107	4V8D\|1\|BA	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	2912
108	4V8B\|1\|BA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	2912
109	4LNT\|1\|YA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	2883
110	4LNT\|1\|RA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	2882
111	4V8B\|1\|DA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	2907
112	4V8D\|1\|DA	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	2907
113	4WSD\|1\|14	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	2909
114	5NDK\|1\|14	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	2909
115	6GSJ\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	2811
116	5IB7\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	2826
117	5IBB\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	2810
118	5E81\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-RAY DIFFRACTION	2.95	2855

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_97519.46 Obsolete

Release history

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