1ANR Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1ANR_001 | 1/A/29:36 | No text annotation | ||
| HL_1ANR_002 | 2/A/29:36 | No text annotation | geometric HL_8C3A_039 NA | |
| HL_1ANR_003 | 3/A/29:36 | No text annotation | ||
| HL_1ANR_004 | 4/A/29:36 | No text annotation | ||
| HL_1ANR_005 | 5/A/29:36 | No text annotation | ||
| HL_1ANR_006 | 6/A/29:36 | No text annotation | ||
| HL_1ANR_028 | 7/A/28:37 | No text annotation | ||
| HL_1ANR_007 | 7/A/29:36 | No text annotation | ||
| HL_1ANR_008 | 8/A/29:36 | No text annotation | ||
| HL_1ANR_009 | 9/A/29:36 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1ANR_010 | 10/A/29:36 | No text annotation | geometric HL_4WF9_003 HL_75660.9 | |
| HL_1ANR_011 | 11/A/29:36 | No text annotation | ||
| HL_1ANR_012 | 12/A/29:36 | No text annotation | geometric HL_4WRT_001 HL_91813.1 | |
| HL_1ANR_029 | 13/A/29:36 | No text annotation | ||
| HL_1ANR_014 | 14/A/29:36 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1ANR_026 | 15/A/27:38 | No text annotation | ||
| HL_1ANR_015 | 15/A/29:36 | No text annotation | ||
| HL_1ANR_016 | 16/A/29:36 | No text annotation | geometric HL_4WF9_003 HL_75660.9 | |
| HL_1ANR_017 | 17/A/29:36 | No text annotation | geometric HL_8C3A_039 NA | |
| HL_1ANR_018 | 18/A/29:36 | No text annotation | ||
| HL_1ANR_030 | 19/A/29:36 | No text annotation | ||
| HL_1ANR_027 | 20/A/27:38 | No text annotation | ||
| HL_1ANR_020 | 20/A/28:37 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1ANR_021 | No text annotation | ||
| HL_1ANR_022 | tRNA D-loop | ||
| HL_1ANR_023 | No text annotation | ||
| HL_1ANR_024 | No text annotation | ||
| HL_1ANR_013 | No text annotation | ||
| HL_1ANR_025 | No text annotation | ||
| HL_1ANR_019 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1ANR_001 | 1/A/21:26, 1/A/39:41 | No text annotation | ||
| IL_1ANR_025 | 2/A/22:26, 2/A/39:40 | Major groove platform with intercalation | geometric IL_8C3A_119 NA | |
| IL_1ANR_003 | 3/A/21:26, 3/A/39:41 | No text annotation | ||
| IL_1ANR_004 | 4/A/22:26, 4/A/39:40 | No text annotation | ||
| IL_1ANR_006 | 5/A/21:26, 5/A/39:41 | No text annotation | ||
| IL_1ANR_026 | 6/A/21:26, 6/A/39:41 | No text annotation | ||
| IL_1ANR_008 | 7/A/21:26, 7/A/39:41 | No text annotation | ||
| IL_1ANR_009 | 8/A/22:26, 8/A/39:40 | Major groove platform with intercalation | geometric IL_5J7L_342 NA | |
| IL_1ANR_030 | 9/A/22:27, 9/A/38:40 | No text annotation | ||
| IL_1ANR_011 | 10/A/21:26, 10/A/39:41 | No text annotation | ||
| IL_1ANR_012 | 11/A/21:26, 11/A/39:41 | No text annotation | ||
| IL_1ANR_013 | 12/A/21:27, 12/A/38:41 | No text annotation | ||
| IL_1ANR_031 | 13/A/21:26, 13/A/39:41 | No text annotation | ||
| IL_1ANR_015 | 14/A/21:27, 14/A/38:41 | No text annotation | ||
| IL_1ANR_017 | 15/A/21:26, 15/A/39:41 | No text annotation | ||
| IL_1ANR_018 | 16/A/21:26, 16/A/39:41 | No text annotation | ||
| IL_1ANR_029 | 17/A/21:26, 17/A/39:41 | No text annotation | ||
| IL_1ANR_021 | 18/A/20:27, 18/A/38:42 | No text annotation | ||
| IL_1ANR_022 | 19/A/21:26, 19/A/39:41 | No text annotation | ||
| IL_1ANR_024 | 20/A/21:26, 20/A/39:41 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1ANR_002 | No text annotation | ||
| IL_1ANR_005 | No text annotation | ||
| IL_1ANR_007 | No text annotation | ||
| IL_1ANR_027 | No text annotation | ||
| IL_1ANR_028 | No text annotation | ||
| IL_1ANR_010 | No text annotation | ||
| IL_1ANR_014 | No text annotation | ||
| IL_1ANR_016 | Isolated non-canonical cWW pair | ||
| IL_1ANR_019 | No text annotation | ||
| IL_1ANR_020 | Isolated non-canonical cWW pair | ||
| IL_1ANR_023 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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